SPAdes Genome Assembler
Java utilities for Bioinformatics
A curated list of resources for learning bioinformatics.
Rapid large-scale prokaryote pan genome analysis
NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore ...
Fast taxonomic classification of metagenomic sequencing reads using a pr...
Viral genome alignment, mutation calling, clade assignment, quality chec...
Rapid phylogenetic analysis of large samples of recombinant bacterial wh...
NGLess: NGS with less work
Rare variant test software for next generation sequencing data
Get assembly statistics from FASTA and FASTQ files
Program for estimating πN/πS, dN/dS, and other diversity measures from n...
Microsatellite Instability (MSI) detection using high-throughput sequenc...
Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Anno...
NextGenMap is a flexible highly sensitive short read mapping tool that h...